STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
patB-2Cystathionine beta-lyase PatB. (109 aa)    
Predicted Functional Partners:
pabA
Aminodeoxychorismate synthase component 2.
    
 0.886
trpG-TRPD
Anthranilate synthase component II.
    
 0.886
aceA
Isocitrate lyase.
  
 
 0.850
EVAR_6138_1
Uncharacterized protein.
  
 
 0.795
EVAR_6139_1
AA_TRNA_LIGASE_II domain-containing protein.
  
 
 0.795
lysC
Aspartokinase; Belongs to the aspartokinase family.
  
 0.789
xerC
Tyrosine recombinase XerC.
  
 0.777
Adi1
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene).
  
 
 0.770
hisC
Histidinol-phosphate aminotransferase.
  
 
 0.758
EVAR_1432_1
Uncharacterized protein.
  
 0.757
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.