Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Dsp1 | EVAR_39358_1 | A0A4C1T8L2 | A0A4C1WPN5 | High mobility group protein DSP1. | Uncharacterized protein. | 0.666 |
Dsp1 | EVAR_70845_1 | A0A4C1T8L2 | A0A4C1SG14 | High mobility group protein DSP1. | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.707 |
Dsp1 | POLRMT-2 | A0A4C1T8L2 | A0A4C1UVU7 | High mobility group protein DSP1. | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. | 0.738 |
Dsp1 | RpI135-2 | A0A4C1T8L2 | A0A4C1TZ09 | High mobility group protein DSP1. | DNA-directed RNA polymerase I subunit RPA2. | 0.621 |
Dsp1 | RpI135-3 | A0A4C1T8L2 | A0A4C1TZ23 | High mobility group protein DSP1. | DNA-directed RNA polymerase I subunit RPA2. | 0.621 |
Dsp1 | RpI135-4 | A0A4C1T8L2 | A0A4C1TZT6 | High mobility group protein DSP1. | DNA-directed RNA polymerase I subunit RPA2; Belongs to the RNA polymerase beta chain family. | 0.621 |
Dsp1 | TFB1M | A0A4C1T8L2 | A0A4C1TZ95 | High mobility group protein DSP1. | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.707 |
Dsp1 | surA | A0A4C1T8L2 | A0A4C1SP21 | High mobility group protein DSP1. | Chaperone SurA; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.707 |
EVAR_10415_1 | POLRMT-2 | A0A4C1UCT5 | A0A4C1UVU7 | Uncharacterized protein. | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. | 0.929 |
EVAR_39358_1 | Dsp1 | A0A4C1WPN5 | A0A4C1T8L2 | Uncharacterized protein. | High mobility group protein DSP1. | 0.666 |
EVAR_39358_1 | HMGB3 | A0A4C1WPN5 | A0A4C1UPK2 | Uncharacterized protein. | High mobility group protein B3. | 0.666 |
EVAR_39358_1 | POLRMT-2 | A0A4C1WPN5 | A0A4C1UVU7 | Uncharacterized protein. | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. | 0.967 |
EVAR_70845_1 | Dsp1 | A0A4C1SG14 | A0A4C1T8L2 | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | High mobility group protein DSP1. | 0.707 |
EVAR_70845_1 | HMGB3 | A0A4C1SG14 | A0A4C1UPK2 | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | High mobility group protein B3. | 0.717 |
EVAR_70845_1 | POLRMT-2 | A0A4C1SG14 | A0A4C1UVU7 | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. | 0.953 |
EVAR_70845_1 | RpI135-2 | A0A4C1SG14 | A0A4C1TZ09 | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | DNA-directed RNA polymerase I subunit RPA2. | 0.502 |
EVAR_70845_1 | RpI135-3 | A0A4C1SG14 | A0A4C1TZ23 | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | DNA-directed RNA polymerase I subunit RPA2. | 0.502 |
EVAR_70845_1 | RpI135-4 | A0A4C1SG14 | A0A4C1TZT6 | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | DNA-directed RNA polymerase I subunit RPA2; Belongs to the RNA polymerase beta chain family. | 0.502 |
HMGB3 | EVAR_39358_1 | A0A4C1UPK2 | A0A4C1WPN5 | High mobility group protein B3. | Uncharacterized protein. | 0.666 |
HMGB3 | EVAR_70845_1 | A0A4C1UPK2 | A0A4C1SG14 | High mobility group protein B3. | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.717 |
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