STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF123-2E3 ubiquitin-protein ligase RNF123. (548 aa)    
Predicted Functional Partners:
UBAC1
Ubiquitin-associated domain-containing protein 1.
   
 
 0.868
EVAR_29052_1
Uncharacterized protein.
   
 0.583
Usp32
Ubiquitin carboxyl-terminal hydrolase 32; Belongs to the peptidase C19 family.
   
 0.583
Usp32-2
Ubiquitin carboxyl-terminal hydrolase 32.
   
 0.583
Usp32-3
Ubiquitin carboxyl-terminal hydrolase 32; Belongs to the peptidase C19 family.
   
 0.583
USP31
Ubiquitin carboxyl-terminal hydrolase 31; Belongs to the peptidase C19 family.
   
 0.583
USP31-2
Ubiquitin carboxyl-terminal hydrolase 31; Belongs to the peptidase C19 family.
   
 0.583
USP20
Ubiquitin carboxyl-terminal hydrolase 20; Belongs to the peptidase C19 family.
   
 0.578
usp20
Ubiquitin carboxyl-terminal hydrolase 20; Belongs to the peptidase C19 family.
   
 0.578
rplR
50S ribosomal protein L18.
   
 0.552
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.