STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mks1Meckel syndrome type 1 protein homolog. (164 aa)    
Predicted Functional Partners:
b9d1
B9 domain-containing protein 1.
    
 0.947
CC2D2A
Coiled-coil and C2 domain-containing protein 2A.
    
 0.934
Tmem67
Meckelin.
     
 0.906
Mettl22
Methyltransferase-like protein 22.
    
 0.850
cep290
Centrosomal protein of 290 kDa.
    
 
 0.563
EVAR_93977_1
Ras-related protein Rab-10.
     
 0.551
RAB8A
Ras-related protein Rab-8A.
     
 0.551
EVAR_94004_1
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
  
 0.532
ci
Transcriptional activator cubitus interruptus.
   
 
  0.526
GLIS3
Zinc finger protein GLIS3.
   
 
  0.526
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.