STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mahj-3Protein mahjong. (918 aa)    
Predicted Functional Partners:
Ddb1
DNA damage-binding protein 1.
    
 0.984
Cul4b
Cullin-4B; Belongs to the cullin family.
   
 0.978
Roc1a
RING-box protein 1A.
    
 
 0.913
ung
Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
    
 
 0.884
RNF7
RING-box protein 2.
    
 
 0.776
CSN5
COP9 signalosome complex subunit 5.
    
   0.524
CSN5-2
COP9 signalosome complex subunit 5.
    
   0.524
mahj-2
Protein mahjong.
  
     0.502
mahj
Protein mahjong.
  
     0.496
hyd-2
E3 ubiquitin-protein ligase hyd.
  
 
 
 0.447
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.