STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rexo4RNA exonuclease 4. (114 aa)    
Predicted Functional Partners:
PAN3
PAN2-PAN3 deadenylation complex subunit PAN3.
    
 0.913
dnaE
DNA polymerase III subunit alpha.
   
 0.890
ppan
Protein Peter pan.
   
   0.887
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.879
Wdr18
WD repeat-containing protein 18.
   
  0.873
Wdr18-2
WD repeat-containing protein 18.
   
  0.873
Imp4
U3 small nucleolar ribonucleoprotein protein IMP4.
   
   0.847
TRMT61A
tRNA (Adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A.
   
   0.846
DNTTIP2
Deoxynucleotidyltransferase terminal-interacting protein 2.
   
    0.831
RpL24-like
Probable ribosome biogenesis protein RLP24.
   
    0.823
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.