STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EVAR_96467_1115 kDa protein in type-1 retrotransposable element R1DM. (341 aa)    
Predicted Functional Partners:
rplP
50S ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
 0.489
rpsC
30S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.489
MRPL16
39S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family.
   
 0.489
RTase-305
Probable RNA-directed DNA polymerase from transposon BS.
  
     0.461
RTase-153
Probable RNA-directed DNA polymerase from transposon BS.
  
     0.441
RTase-42
Probable RNA-directed DNA polymerase from transposon BS.
  
     0.407
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.