STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC170Coiled-coil domain-containing protein 170. (947 aa)    
Predicted Functional Partners:
DMAP1
DNA methyltransferase 1-associated protein 1.
   
 0.946
pont
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.
    
 0.944
rept
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.
   
 0.940
EVAR_85023_1
Histone H2A; Belongs to the histone H2A family.
    
 0.927
ZNHIT1
Zinc finger HIT domain-containing protein 1.
    
 
 0.901
YL-1
Vacuolar protein sorting-associated protein 72 homolog.
    
 0.889
YL-1-2
Vacuolar protein sorting-associated protein 72 homolog.
    
 0.889
ACTR6
Actin-related protein 6; Belongs to the actin family.
    
 
 0.858
EVAR_102346_1
Uncharacterized protein.
    
 0.832
CFDP1
Craniofacial development protein 1.
    
 
 0.816
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.