STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Atxn1Ataxin-1. (459 aa)    
Predicted Functional Partners:
CIC
Protein capicua homolog.
    
 
 0.894
cic
Transcription factor capicua.
    
 
 0.894
Su(H)
Suppressor of hairless protein.
    
 0.796
Su(H)-2
Suppressor of hairless protein.
    
 0.796
IST1
IST1 homolog.
    
 0.764
pum
Maternal protein pumilio.
     
 0.700
pum2
Pumilio homolog 2.
     
 0.700
pum-2
Maternal protein pumilio.
     
 0.700
EVAR_27_1
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.682
EVAR_36_1
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.682
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.