STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EVAR_88565_1MADF domain-containing protein. (310 aa)    
Predicted Functional Partners:
EVAR_6138_1
Uncharacterized protein.
  
 
 0.658
EVAR_6139_1
AA_TRNA_LIGASE_II domain-containing protein.
  
 
 0.658
EVAR_97344_1
Ribosome biogenesis protein BOP1 homolog.
   
    0.567
EVAR_97342_1
Ribosome biogenesis protein BOP1 homolog.
   
    0.567
EVAR_94611_1
tRNA (guanine(26)-N(2))-dimethyltransferase.
   
 
 0.542
EVAR_88638_1
tRNA (Guanine-N(7)-)-methyltransferase.
  
 
 0.496
trmB
tRNA (Guanine-N(7)-)-methyltransferase.
  
 
 0.496
EVAR_3955_1
Uncharacterized protein.
  
     0.482
Ddx56
Probable ATP-dependent RNA helicase DDX56.
  
   0.479
PUS1
tRNA pseudouridine synthase A.
  
 
 0.476
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.