STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ygaU-2Uncharacterized protein YgaU. (145 aa)    
Predicted Functional Partners:
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase.
    
 0.891
aceA
Isocitrate lyase.
  
 
 0.873
gatY
D-tagatose-1,6-bisphosphate aldolase subunit GatY.
  
 0.826
otnK
3-oxo-tetronate kinase.
  
 0.826
fbaA
Probable fructose-bisphosphate aldolase.
  
 0.826
EVAR_6138_1
Uncharacterized protein.
  
 
 0.811
EVAR_6139_1
AA_TRNA_LIGASE_II domain-containing protein.
  
 
 0.811
Sply
Sphingosine-1-phosphate lyase.
   
 0.800
HOP3
Hsp70-Hsp90 organizing protein 3.
   
 0.796
purM
Phosphoribosylformylglycinamidine cyclo-ligase.
    
 0.781
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.