STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atl-2DNA base-flipping protein. (114 aa)    
Predicted Functional Partners:
EVAR_76879_1
Peptidase S1 domain-containing protein.
  
 
 0.684
EVAR_63564_1
HTH araC/xylS-type domain-containing protein.
  
 
 0.684
Xpac
DNA repair protein complementing XP-A cells homolog.
    
 
 0.483
mutS-2
DNA mismatch repair protein MutS.
   
 
 0.479
uvrC
UvrABC system protein C.
     
 0.476
recJ
Single-stranded-DNA-specific exonuclease RecJ.
     
 0.473
EVAR_58651_1
ENDO3c domain-containing protein.
     
 0.472
tos
Exonuclease 1.
   
 
 0.454
Rev3l
DNA polymerase.
   
 
 0.431
ALKBH7
Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial.
  
  
 0.429
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.