cutc-1 protein (Eumeta japonica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

cutc-1

Copper homeostasis protein cutC homolog. (246 aa)

Predicted Functional Partners:

Sam-S

0.641

metK

0.641

pabA

0.413

trpG-TRPD

0.413

aceA

0.412

mntH

0.412

mnmG

0.406

MTO1

0.406

ergic3

0.406

pheA

0.403

Your Current Organism:

Eumeta japonica

NCBI taxonomy Id: 151549
Other names: E. japonica

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MTO1	cutc-1	A0A4C1TGE8	A0A4C1XCM2	Protein MTO1 homolog, mitochondrial.	Copper homeostasis protein cutC homolog.	0.406
MTO1	mnmG	A0A4C1TGE8	A0A4C1SIZ8	Protein MTO1 homolog, mitochondrial.	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG.	0.477
Sam-S	cutc-1	A0A4C1WPU4	A0A4C1XCM2	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.	Copper homeostasis protein cutC homolog.	0.641
Sam-S	pabA	A0A4C1WPU4	A0A4C1SHV5	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.	Aminodeoxychorismate synthase component 2.	0.470
Sam-S	trpG-TRPD	A0A4C1WPU4	A0A4C1W324	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.	Anthranilate synthase component II.	0.470
aceA	cutc-1	A0A4C1SJZ9	A0A4C1XCM2	Isocitrate lyase.	Copper homeostasis protein cutC homolog.	0.412
cutc-1	MTO1	A0A4C1XCM2	A0A4C1TGE8	Copper homeostasis protein cutC homolog.	Protein MTO1 homolog, mitochondrial.	0.406
cutc-1	Sam-S	A0A4C1XCM2	A0A4C1WPU4	Copper homeostasis protein cutC homolog.	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.	0.641
cutc-1	aceA	A0A4C1XCM2	A0A4C1SJZ9	Copper homeostasis protein cutC homolog.	Isocitrate lyase.	0.412
cutc-1	ergic3	A0A4C1XCM2	A0A4C1U5G4	Copper homeostasis protein cutC homolog.	Endoplasmic reticulum-Golgi intermediate compartment protein 3.	0.406
cutc-1	metK	A0A4C1XCM2	A0A4C1YFI9	Copper homeostasis protein cutC homolog.	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.	0.641
cutc-1	mnmG	A0A4C1XCM2	A0A4C1SIZ8	Copper homeostasis protein cutC homolog.	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG.	0.406
cutc-1	mntH	A0A4C1XCM2	A0A4C1UFM9	Copper homeostasis protein cutC homolog.	Divalent metal cation transporter MntH.	0.412
cutc-1	pabA	A0A4C1XCM2	A0A4C1SHV5	Copper homeostasis protein cutC homolog.	Aminodeoxychorismate synthase component 2.	0.413
cutc-1	pheA	A0A4C1XCM2	A0A4C1XU85	Copper homeostasis protein cutC homolog.	P-protein.	0.403
cutc-1	trpG-TRPD	A0A4C1XCM2	A0A4C1W324	Copper homeostasis protein cutC homolog.	Anthranilate synthase component II.	0.413
ergic3	cutc-1	A0A4C1U5G4	A0A4C1XCM2	Endoplasmic reticulum-Golgi intermediate compartment protein 3.	Copper homeostasis protein cutC homolog.	0.406
metK	cutc-1	A0A4C1YFI9	A0A4C1XCM2	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.	Copper homeostasis protein cutC homolog.	0.641
metK	pabA	A0A4C1YFI9	A0A4C1SHV5	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.	Aminodeoxychorismate synthase component 2.	0.470
metK	trpG-TRPD	A0A4C1YFI9	A0A4C1W324	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.	Anthranilate synthase component II.	0.470