Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Appl | Appl-2 | A0A4C1VGX3 | A0A4C1VH27 | Amyloid-beta-like protein. | Amyloid-beta-like protein. | 0.437 |
Appl | EVAR_9395_1 | A0A4C1VGX3 | A0A4C1UDU6 | Amyloid-beta-like protein. | Uncharacterized protein. | 0.634 |
Appl | Nct | A0A4C1VGX3 | A0A4C1XY36 | Amyloid-beta-like protein. | Nicastrin. | 0.871 |
Appl | Psn | A0A4C1VGX3 | A0A4C1SY27 | Amyloid-beta-like protein. | Presenilin homolog. | 0.634 |
Appl | Psn-2 | A0A4C1VGX3 | A0A4C1UCX1 | Amyloid-beta-like protein. | Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. | 0.634 |
Appl | pen-2 | A0A4C1VGX3 | A0A4C1X0S5 | Amyloid-beta-like protein. | Gamma-secretase subunit pen-2. | 0.571 |
Appl-2 | Appl | A0A4C1VH27 | A0A4C1VGX3 | Amyloid-beta-like protein. | Amyloid-beta-like protein. | 0.437 |
Appl-2 | EVAR_9395_1 | A0A4C1VH27 | A0A4C1UDU6 | Amyloid-beta-like protein. | Uncharacterized protein. | 0.634 |
Appl-2 | Nct | A0A4C1VH27 | A0A4C1XY36 | Amyloid-beta-like protein. | Nicastrin. | 0.871 |
Appl-2 | Psn | A0A4C1VH27 | A0A4C1SY27 | Amyloid-beta-like protein. | Presenilin homolog. | 0.634 |
Appl-2 | Psn-2 | A0A4C1VH27 | A0A4C1UCX1 | Amyloid-beta-like protein. | Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. | 0.634 |
Appl-2 | pen-2 | A0A4C1VH27 | A0A4C1X0S5 | Amyloid-beta-like protein. | Gamma-secretase subunit pen-2. | 0.571 |
EVAR_53144_1 | EVAR_9395_1 | A0A4C1YFA8 | A0A4C1UDU6 | Neurogenic locus Notch protein. | Uncharacterized protein. | 0.811 |
EVAR_53144_1 | Nct | A0A4C1YFA8 | A0A4C1XY36 | Neurogenic locus Notch protein. | Nicastrin. | 0.865 |
EVAR_53144_1 | Psn | A0A4C1YFA8 | A0A4C1SY27 | Neurogenic locus Notch protein. | Presenilin homolog. | 0.811 |
EVAR_53144_1 | Psn-2 | A0A4C1YFA8 | A0A4C1UCX1 | Neurogenic locus Notch protein. | Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. | 0.811 |
EVAR_53144_1 | Ser | A0A4C1YFA8 | A0A4C1V1W9 | Neurogenic locus Notch protein. | Protein serrate. | 0.949 |
EVAR_53144_1 | pen-2 | A0A4C1YFA8 | A0A4C1X0S5 | Neurogenic locus Notch protein. | Gamma-secretase subunit pen-2. | 0.806 |
EVAR_53147_1 | EVAR_9395_1 | A0A4C1YEW6 | A0A4C1UDU6 | Neurogenic locus Notch protein. | Uncharacterized protein. | 0.811 |
EVAR_53147_1 | Nct | A0A4C1YEW6 | A0A4C1XY36 | Neurogenic locus Notch protein. | Nicastrin. | 0.865 |
page 1 of 5