Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
adhE | grcA | A0A4C1W3G7 | A0A4C1XSV9 | Aldehyde-alcohol dehydrogenase. | Autonomous glycyl radical cofactor. | 0.430 |
adhE | pflA | A0A4C1W3G7 | A0A4C1XZH4 | Aldehyde-alcohol dehydrogenase. | Pyruvate formate-lyase 1-activating enzyme. | 0.422 |
adhE | pflB | A0A4C1W3G7 | A0A4C1Y390 | Aldehyde-alcohol dehydrogenase. | Formate acetyltransferase 1. | 0.429 |
grcA | adhE | A0A4C1XSV9 | A0A4C1W3G7 | Autonomous glycyl radical cofactor. | Aldehyde-alcohol dehydrogenase. | 0.430 |
grcA | pflA | A0A4C1XSV9 | A0A4C1XZH4 | Autonomous glycyl radical cofactor. | Pyruvate formate-lyase 1-activating enzyme. | 0.543 |
pflA | adhE | A0A4C1XZH4 | A0A4C1W3G7 | Pyruvate formate-lyase 1-activating enzyme. | Aldehyde-alcohol dehydrogenase. | 0.422 |
pflA | grcA | A0A4C1XZH4 | A0A4C1XSV9 | Pyruvate formate-lyase 1-activating enzyme. | Autonomous glycyl radical cofactor. | 0.543 |
pflA | pflB | A0A4C1XZH4 | A0A4C1Y390 | Pyruvate formate-lyase 1-activating enzyme. | Formate acetyltransferase 1. | 0.543 |
pflB | adhE | A0A4C1Y390 | A0A4C1W3G7 | Formate acetyltransferase 1. | Aldehyde-alcohol dehydrogenase. | 0.429 |
pflB | pflA | A0A4C1Y390 | A0A4C1XZH4 | Formate acetyltransferase 1. | Pyruvate formate-lyase 1-activating enzyme. | 0.543 |