STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
snf8Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (251 aa)    
Predicted Functional Partners:
vps25
Inositol-pentakisphosphate 2-kinase; Phosphorylates Ins(1,3,4,5,6)P5 at position 2 to form Ins(1,2,3,4,5,6)P6 (InsP6 or phytate).
   
 0.999
chmp6
Charged multivesicular body protein 6.
    
 0.995
Vps36
Vacuolar protein-sorting-associated protein 36.
   
 0.991
Vps36-2
Vacuolar protein-sorting-associated protein 36.
   
 0.991
chmp4b
Charged multivesicular body protein 4b.
    
 0.983
EVAR_99201_1
Uncharacterized protein.
    
 0.957
Tsg101
Tumor susceptibility gene 101 protein.
    
 0.936
Vps37a
Vacuolar protein sorting-associated protein 37A.
     
 0.927
MVB12B
Multivesicular body subunit 12B.
     
 0.898
chmp2a
Charged multivesicular body protein 2a.
   
 0.883
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
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