Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFL1 | MRTO4 | A0A4C1XMG6 | A0A4C1US20 | Elongation factor-like GTPase 1. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.950 |
EFL1 | RpL11 | A0A4C1XMG6 | A0A4C1TRW6 | Elongation factor-like GTPase 1. | 60S ribosomal protein L11. | 0.942 |
EFL1 | RpL24 | A0A4C1XMG6 | A0A4C1XEW7 | Elongation factor-like GTPase 1. | 60S ribosomal protein L24. | 0.965 |
EFL1 | RpL34 | A0A4C1XMG6 | A0A4C1X611 | Elongation factor-like GTPase 1. | 60S ribosomal protein L34. | 0.947 |
EFL1 | RpL40 | A0A4C1XMG6 | A0A4C1Z9M2 | Elongation factor-like GTPase 1. | Ubiquitin-60S ribosomal protein L40. | 0.792 |
EFL1 | RpS19a | A0A4C1XMG6 | A0A4C1UC40 | Elongation factor-like GTPase 1. | 40S ribosomal protein S19a. | 0.965 |
EFL1 | SBDS | A0A4C1XMG6 | A0A4C1YX96 | Elongation factor-like GTPase 1. | Ribosome maturation protein SBDS. | 0.965 |
EFL1 | UBA52 | A0A4C1XMG6 | A0A4C1U9G8 | Elongation factor-like GTPase 1. | Ubiquitin-60S ribosomal protein L40. | 0.792 |
EFL1 | rplE | A0A4C1XMG6 | A0A4C1SGW6 | Elongation factor-like GTPase 1. | 50S ribosomal protein L5; Belongs to the universal ribosomal protein uL5 family. | 0.942 |
Efl1 | MRTO4 | A0A4C1YFD1 | A0A4C1US20 | Elongation factor-like GTPase 1. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.950 |
Efl1 | RpL11 | A0A4C1YFD1 | A0A4C1TRW6 | Elongation factor-like GTPase 1. | 60S ribosomal protein L11. | 0.942 |
Efl1 | RpL24 | A0A4C1YFD1 | A0A4C1XEW7 | Elongation factor-like GTPase 1. | 60S ribosomal protein L24. | 0.965 |
Efl1 | RpL34 | A0A4C1YFD1 | A0A4C1X611 | Elongation factor-like GTPase 1. | 60S ribosomal protein L34. | 0.947 |
Efl1 | RpL40 | A0A4C1YFD1 | A0A4C1Z9M2 | Elongation factor-like GTPase 1. | Ubiquitin-60S ribosomal protein L40. | 0.792 |
Efl1 | RpS19a | A0A4C1YFD1 | A0A4C1UC40 | Elongation factor-like GTPase 1. | 40S ribosomal protein S19a. | 0.965 |
Efl1 | SBDS | A0A4C1YFD1 | A0A4C1YX96 | Elongation factor-like GTPase 1. | Ribosome maturation protein SBDS. | 0.965 |
Efl1 | UBA52 | A0A4C1YFD1 | A0A4C1U9G8 | Elongation factor-like GTPase 1. | Ubiquitin-60S ribosomal protein L40. | 0.792 |
Efl1 | rplE | A0A4C1YFD1 | A0A4C1SGW6 | Elongation factor-like GTPase 1. | 50S ribosomal protein L5; Belongs to the universal ribosomal protein uL5 family. | 0.942 |
MRTO4 | EFL1 | A0A4C1US20 | A0A4C1XMG6 | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | Elongation factor-like GTPase 1. | 0.950 |
MRTO4 | Efl1 | A0A4C1US20 | A0A4C1YFD1 | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | Elongation factor-like GTPase 1. | 0.950 |
page 1 of 6