STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBDSRibosome maturation protein SBDS. (211 aa)    
Predicted Functional Partners:
EFL1
Elongation factor-like GTPase 1.
  
 
 0.965
Efl1
Elongation factor-like GTPase 1.
  
 
 0.965
UBA52
Ubiquitin-60S ribosomal protein L40.
   
 
 0.937
RpL40
Ubiquitin-60S ribosomal protein L40.
   
 
 0.937
RpS19a
40S ribosomal protein S19a.
   
 
 0.930
RpL24
60S ribosomal protein L24.
  
 
 0.929
RpL11
60S ribosomal protein L11.
   
 
 0.925
rplE
50S ribosomal protein L5; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.919
MRTO4
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.915
RpL34
60S ribosomal protein L34.
   
   0.914
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
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