STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ythdc2-2Probable ATP-dependent RNA helicase YTHDC2. (1096 aa)    
Predicted Functional Partners:
Cpsf100
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.983
nudt21
Cleavage and polyadenylation specificity factor subunit 5.
   
 0.965
Cpsf160
Cleavage and polyadenylation specificity factor subunit 1.
   
 0.962
Cpsf160-2
Cleavage and polyadenylation specificity factor subunit 1.
   
 0.962
EVAR_72811_1
Uncharacterized protein.
   
 0.940
AP2M1
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
    
 0.940
FIP1L1
Pre-mRNA 3'-end-processing factor FIP1.
   
 0.940
PAPOLG
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 0.932
Cstf1
Cleavage stimulation factor subunit 1.
   
 
 0.930
Cherp
Calcium homeostasis endoplasmic reticulum protein.
   
 0.924
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.