STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tolBTol-Pal system protein TolB. (248 aa)    
Predicted Functional Partners:
pal
Peptidoglycan-associated lipoprotein.
 
 0.983
yiaD
Probable lipoprotein YiaD.
  
 0.978
ompA
Outer membrane protein A.
  
 0.978
rlpA
Endolytic peptidoglycan transglycosylase RlpA.
  
 
 0.796
purB
Adenylosuccinate lyase.
    
  0.781
ADSL
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
  0.781
ymaE
Uncharacterized protein YmaE.
   
  0.770
FDX1
Adrenodoxin, mitochondrial.
   
  0.770
Aprt
Adenine phosphoribosyltransferase.
    
  0.756
apt
Adenine phosphoribosyltransferase.
    
  0.756
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.