Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EVAR_1339_1 | EVAR_21321_1 | A0A4C1SJU5 | A0A4C1ZLF8 | Non-heme chloroperoxidase. | Nicotinate phosphoribosyltransferase. | 0.809 |
EVAR_1339_1 | EVAR_45175_1 | A0A4C1SJU5 | A0A4C1YQ11 | Non-heme chloroperoxidase. | Arylesterase. | 0.832 |
EVAR_1339_1 | EVAR_60123_1 | A0A4C1SJU5 | A0A4C1ZRL7 | Non-heme chloroperoxidase. | CTP_transf_like domain-containing protein. | 0.886 |
EVAR_1339_1 | EVAR_88731_1 | A0A4C1SJU5 | A0A4C1XHW3 | Non-heme chloroperoxidase. | Probable glutamine-dependent NAD(+) synthetase. | 0.431 |
EVAR_1339_1 | NMRK1 | A0A4C1SJU5 | A0A4C1XKR4 | Non-heme chloroperoxidase. | Nicotinamide riboside kinase 1. | 0.784 |
EVAR_1339_1 | NMRK1-2 | A0A4C1SJU5 | A0A4C1XN16 | Non-heme chloroperoxidase. | Nicotinamide riboside kinase 1. | 0.784 |
EVAR_1339_1 | PNP | A0A4C1SJU5 | A0A4C1VPH2 | Non-heme chloroperoxidase. | Purine nucleoside phosphorylase. | 0.845 |
EVAR_1339_1 | nadC | A0A4C1SJU5 | A0A4C1SNZ2 | Non-heme chloroperoxidase. | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family. | 0.816 |
EVAR_1339_1 | nudC | A0A4C1SJU5 | A0A4C1SJU3 | Non-heme chloroperoxidase. | NADH pyrophosphatase. | 0.805 |
EVAR_1339_1 | rutD | A0A4C1SJU5 | A0A4C1Y334 | Non-heme chloroperoxidase. | Aminoacrylate hydrolase RutD. | 0.832 |
EVAR_21321_1 | EVAR_1339_1 | A0A4C1ZLF8 | A0A4C1SJU5 | Nicotinate phosphoribosyltransferase. | Non-heme chloroperoxidase. | 0.809 |
EVAR_21321_1 | EVAR_45175_1 | A0A4C1ZLF8 | A0A4C1YQ11 | Nicotinate phosphoribosyltransferase. | Arylesterase. | 0.809 |
EVAR_21321_1 | EVAR_60123_1 | A0A4C1ZLF8 | A0A4C1ZRL7 | Nicotinate phosphoribosyltransferase. | CTP_transf_like domain-containing protein. | 0.875 |
EVAR_21321_1 | EVAR_88731_1 | A0A4C1ZLF8 | A0A4C1XHW3 | Nicotinate phosphoribosyltransferase. | Probable glutamine-dependent NAD(+) synthetase. | 0.828 |
EVAR_21321_1 | NMRK1 | A0A4C1ZLF8 | A0A4C1XKR4 | Nicotinate phosphoribosyltransferase. | Nicotinamide riboside kinase 1. | 0.863 |
EVAR_21321_1 | NMRK1-2 | A0A4C1ZLF8 | A0A4C1XN16 | Nicotinate phosphoribosyltransferase. | Nicotinamide riboside kinase 1. | 0.863 |
EVAR_21321_1 | PNP | A0A4C1ZLF8 | A0A4C1VPH2 | Nicotinate phosphoribosyltransferase. | Purine nucleoside phosphorylase. | 0.847 |
EVAR_21321_1 | nadC | A0A4C1ZLF8 | A0A4C1SNZ2 | Nicotinate phosphoribosyltransferase. | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family. | 0.909 |
EVAR_21321_1 | nudC | A0A4C1ZLF8 | A0A4C1SJU3 | Nicotinate phosphoribosyltransferase. | NADH pyrophosphatase. | 0.854 |
EVAR_21321_1 | rutD | A0A4C1ZLF8 | A0A4C1Y334 | Nicotinate phosphoribosyltransferase. | Aminoacrylate hydrolase RutD. | 0.809 |
page 1 of 6