STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sde2Replication stress response regulator SDE2. (243 aa)    
Predicted Functional Partners:
Slu7
Pre-mRNA-splicing factor SLU7.
    
 0.987
Syf2
Pre-mRNA-splicing factor Syf2.
    
  0.979
fam32al
Protein FAM32A-like.
    
 0.969
prkrip1
PRKR-interacting protein 1 homolog.
    
 0.968
EVAR_41485_1
WD_REPEATS_REGION domain-containing protein.
    
 
 0.955
EVAR_20559_1
Protein BUD31 homolog.
    
   0.950
EVAR_91195_1
NKAP family protein CG6066.
    
 0.943
cwc15-a
Protein CWC15 homolog A.
    
 
 0.943
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component.
    
   0.931
SNRPA1
U2 small nuclear ribonucleoprotein A.
    
   0.931
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.