STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORF1-227Nucleic-acid-binding protein from transposon X-element. (489 aa)    
Predicted Functional Partners:
Pla2g1b
Phospholipase A(2).
     
 0.482
PLA2G12B
Group XIIB secretory phospholipase A2-like protein.
     
 0.475
RpL13A
60S ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
   
   0.444
Bard1
BRCA1-associated RING domain protein 1.
    
  0.439
PLA2G15
Group XV phospholipase A2.
     
 0.438
rplM
50S ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
   0.417
RpL8
60S ribosomal protein L8.
   
   0.411
EVAR_81263_1
Ubiquitin-40S ribosomal protein S27a.
    
  0.401
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.