STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EVAR_63300_1Uncharacterized protein. (390 aa)    
Predicted Functional Partners:
Cherp
Calcium homeostasis endoplasmic reticulum protein.
   
 0.999
SF3A1
Splicing factor 3A subunit 1.
   
 0.991
sf3b1
ATP-dependent DNA helicase; Belongs to the helicase family.
   
 0.991
sap-49
Splicing factor 3B subunit 4.
   
 0.990
Sf3b3
Splicing factor 3B subunit 3.
   
 0.990
Phf5a
PHD finger-like domain-containing protein 5A.
    
 0.989
SmD3
Small nuclear ribonucleoprotein Sm D3.
   
 0.981
SF3A2
Splicing factor 3A subunit 2.
   
 0.980
SNRPA1
U2 small nuclear ribonucleoprotein A.
   
 0.980
Snrpd1
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
 0.980
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.