STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPS6KA5-3Ribosomal protein S6 kinase alpha-5. (145 aa)    
Predicted Functional Partners:
Rint1
RAD50-interacting protein 1.
    
 0.946
USE1
Vesicle transport protein USE1.
    
 0.935
sec22b
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
   
 0.921
stx18
Syntaxin-18.
    
 0.850
stx18-2
Syntaxin-18.
    
 0.850
CREB1
Cyclic AMP-responsive element-binding protein 1.
   
 0.843
Atf2
Cyclic AMP-dependent transcription factor ATF-2.
    
 0.824
TSC2
Tuberin.
    
 0.811
MAPK1-2
Mitogen-activated protein kinase 1.
   
  0.797
mapk1
Mitogen-activated protein kinase 1.
   
  0.797
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.