STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrp1bLow-density lipoprotein receptor-related protein 1B. (890 aa)    
Predicted Functional Partners:
DAG1
Dystroglycan.
   
 0.723
Dag1
Dystroglycan.
   
 0.723
Nid1
Nidogen-1.
   
 0.653
GOT1
Aspartate aminotransferase.
     
 0.631
FLT1
Vascular endothelial growth factor receptor 1.
    
  0.572
VgR-2
Vitellogenin receptor.
  
 
  0.538
yl-2
Vitellogenin receptor.
  
 
0.534
Itgb3
Integrin beta; Belongs to the integrin beta chain family.
  
  
 0.506
Sorl1-3
Sortilin-related receptor.
  
 
 
0.500
CSPG4
Chondroitin sulfate proteoglycan 4.
   
 
  0.488
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.