STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQ10_05710Fe3+/spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (368 aa)    
Predicted Functional Partners:
CQ10_29960
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.982
CQ10_05700
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.978
CQ10_05705
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.973
CQ10_12660
Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.896
CQ10_30025
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.894
CQ10_05695
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.885
CQ10_09395
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.880
CQ10_30030
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.879
CQ10_12655
Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.877
CQ10_06445
Spermidine/putrescine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 
 0.810
Your Current Organism:
Bradyrhizobium valentinum
NCBI taxonomy Id: 1518501
Other names: B. valentinum, Bradyrhizobium sp. LmjM2, Bradyrhizobium sp. LmjM3, Bradyrhizobium sp. LmjM6, CECT 8364, LMG 2761, LMG:2761, strain LmjM3
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