STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQ10_19865Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (363 aa)    
Predicted Functional Partners:
hmuV
Iron ABC transporter; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 0.998
CQ10_19870
Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.995
CQ10_09335
Iron-hydroxamate transporter ATP-binding subunit; Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.993
CQ10_10545
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.992
CQ10_09325
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.976
CQ10_21730
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.958
CQ10_10540
Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.939
CQ10_19880
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.835
CQ10_19875
Hemin transporter HemP; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.706
CQ10_09315
Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.592
Your Current Organism:
Bradyrhizobium valentinum
NCBI taxonomy Id: 1518501
Other names: B. valentinum, Bradyrhizobium sp. LmjM2, Bradyrhizobium sp. LmjM3, Bradyrhizobium sp. LmjM6, CECT 8364, LMG 2761, LMG:2761, strain LmjM3
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