STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQ10_32990Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (323 aa)    
Predicted Functional Partners:
CQ10_16060
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.816
CQ10_20325
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.816
CQ10_01185
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.815
CQ10_18985
Tricarboxylate transporter family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.815
CQ10_00340
Tricarboxylate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.813
CQ10_12525
Tripartite tricarboxylate transporter TctA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.813
CQ10_18590
Tricarboxylate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.813
CQ10_37515
Tricarboxylate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.813
CQ10_28830
C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.811
CQ10_32995
Acetolactate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.668
Your Current Organism:
Bradyrhizobium valentinum
NCBI taxonomy Id: 1518501
Other names: B. valentinum, Bradyrhizobium sp. LmjM2, Bradyrhizobium sp. LmjM3, Bradyrhizobium sp. LmjM6, CECT 8364, LMG 2761, LMG:2761, strain LmjM3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.