A0A182LDD8 protein (Anopheles coluzzii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A182LDD8

Uncharacterized protein. (327 aa)

Predicted Functional Partners:

A0A182LGF8

0.664

A0A182KXE5

0.439

A0A182LDE0

0.424

A0A182KRQ3

0.420

A0A182LDE1

0.419

A0A182L6T2

0.412

A0A182LB12

0.412

Your Current Organism:

Anopheles coluzzii

NCBI taxonomy Id: 1518534
Other names: A. coluzzii, Anopheles coluzzii Coetzee & Wilkerson, 2013, Anopheles gambiae M

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182KRQ3	A0A182L6T2	Protein kinase domain-containing protein.	Uncharacterized protein.	0.477
A0A182KRQ3	A0A182LB12	Protein kinase domain-containing protein.	Uncharacterized protein.	0.477
A0A182KRQ3	A0A182LDD8	Protein kinase domain-containing protein.	Uncharacterized protein.	0.420
A0A182KRQ3	A0A182LDE0	Protein kinase domain-containing protein.	Uncharacterized protein.	0.420
A0A182KRQ3	A0A182LDE1	Protein kinase domain-containing protein.	Uncharacterized protein.	0.420
A0A182KXE5	A0A182L6T2	Protein oskar.	Uncharacterized protein.	0.521
A0A182KXE5	A0A182LB12	Protein oskar.	Uncharacterized protein.	0.521
A0A182KXE5	A0A182LDD8	Protein oskar.	Uncharacterized protein.	0.439
A0A182KXE5	A0A182LDE0	Protein oskar.	Uncharacterized protein.	0.439
A0A182KXE5	A0A182LDE1	Protein oskar.	Uncharacterized protein.	0.439
A0A182L6T2	A0A182KRQ3	Uncharacterized protein.	Protein kinase domain-containing protein.	0.477
A0A182L6T2	A0A182KXE5	Uncharacterized protein.	Protein oskar.	0.521
A0A182L6T2	A0A182LB12	Uncharacterized protein.	Uncharacterized protein.	0.911
A0A182L6T2	A0A182LDD8	Uncharacterized protein.	Uncharacterized protein.	0.412
A0A182L6T2	A0A182LDE0	Uncharacterized protein.	Uncharacterized protein.	0.412
A0A182L6T2	A0A182LDE1	Uncharacterized protein.	Uncharacterized protein.	0.412
A0A182LB12	A0A182KRQ3	Uncharacterized protein.	Protein kinase domain-containing protein.	0.477
A0A182LB12	A0A182KXE5	Uncharacterized protein.	Protein oskar.	0.521
A0A182LB12	A0A182L6T2	Uncharacterized protein.	Uncharacterized protein.	0.911
A0A182LB12	A0A182LDD8	Uncharacterized protein.	Uncharacterized protein.	0.412