SMD00421.1 protein (Pedobacter africanus) - STRING interaction network

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Known Interactions

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Predicted Interactions

gene neighborhood

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textmining

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protein homology

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Score

SMD00421.1

TonB dependent receptor. (567 aa)

Predicted Functional Partners:

SMD00428.1

0.950

SMD00387.1

0.939

SMD00397.1

0.877

SMD00407.1

0.789

SMC60141.1

0.746

SMD07498.1

0.735

SMD02827.1

0.719

SMD06634.1

0.712

SMD05943.1

0.711

SMC53341.1

0.702

Your Current Organism:

Pedobacter africanus

NCBI taxonomy Id: 151894
Other names: CCUG 39353, CIP 105499, DSM 12126, LMG 10353, LMG:10353, NBRC 100065, NCIMB 13641, P. africanus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SMC53341.1	SMC60141.1	SAMN04488524_1067	SAMN04488524_1424	Outer membrane protein beta-barrel domain-containing protein.	Putative porin.	0.766
SMC53341.1	SMD00387.1	SAMN04488524_1067	SAMN04488524_4007	Outer membrane protein beta-barrel domain-containing protein.	Outer membrane transport energization protein TonB.	0.633
SMC53341.1	SMD00421.1	SAMN04488524_1067	SAMN04488524_4011	Outer membrane protein beta-barrel domain-containing protein.	TonB dependent receptor.	0.702
SMC53341.1	SMD00428.1	SAMN04488524_1067	SAMN04488524_4012	Outer membrane protein beta-barrel domain-containing protein.	Tetratricopeptide repeat-containing protein.	0.516
SMC53341.1	SMD02827.1	SAMN04488524_1067	SAMN04488524_4304	Outer membrane protein beta-barrel domain-containing protein.	Polyketide cyclase / dehydrase and lipid transport.	0.759
SMC53341.1	SMD05943.1	SAMN04488524_1067	SAMN04488524_4541	Outer membrane protein beta-barrel domain-containing protein.	pRiA4b ORF-3-like protein.	0.650
SMC53341.1	SMD06634.1	SAMN04488524_1067	SAMN04488524_4623	Outer membrane protein beta-barrel domain-containing protein.	Hypothetical protein.	0.670
SMC53341.1	SMD07498.1	SAMN04488524_1067	SAMN04488524_4714	Outer membrane protein beta-barrel domain-containing protein.	Family of unknown function; Non-canonical start codon; manually curated.	0.747
SMC60141.1	SMC53341.1	SAMN04488524_1424	SAMN04488524_1067	Putative porin.	Outer membrane protein beta-barrel domain-containing protein.	0.766
SMC60141.1	SMD00387.1	SAMN04488524_1424	SAMN04488524_4007	Putative porin.	Outer membrane transport energization protein TonB.	0.857
SMC60141.1	SMD00397.1	SAMN04488524_1424	SAMN04488524_4008	Putative porin.	Biopolymer transport protein ExbD.	0.461
SMC60141.1	SMD00421.1	SAMN04488524_1424	SAMN04488524_4011	Putative porin.	TonB dependent receptor.	0.746
SMC60141.1	SMD00428.1	SAMN04488524_1424	SAMN04488524_4012	Putative porin.	Tetratricopeptide repeat-containing protein.	0.700
SMC60141.1	SMD02827.1	SAMN04488524_1424	SAMN04488524_4304	Putative porin.	Polyketide cyclase / dehydrase and lipid transport.	0.765
SMC60141.1	SMD05943.1	SAMN04488524_1424	SAMN04488524_4541	Putative porin.	pRiA4b ORF-3-like protein.	0.747
SMC60141.1	SMD06634.1	SAMN04488524_1424	SAMN04488524_4623	Putative porin.	Hypothetical protein.	0.727
SMC60141.1	SMD07498.1	SAMN04488524_1424	SAMN04488524_4714	Putative porin.	Family of unknown function; Non-canonical start codon; manually curated.	0.772
SMD00387.1	SMC53341.1	SAMN04488524_4007	SAMN04488524_1067	Outer membrane transport energization protein TonB.	Outer membrane protein beta-barrel domain-containing protein.	0.633
SMD00387.1	SMC60141.1	SAMN04488524_4007	SAMN04488524_1424	Outer membrane transport energization protein TonB.	Putative porin.	0.857
SMD00387.1	SMD00397.1	SAMN04488524_4007	SAMN04488524_4008	Outer membrane transport energization protein TonB.	Biopolymer transport protein ExbD.	0.977