Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AND83435.1Hypothetical protein. (226 aa)    
Predicted Functional Partners:
AND83434.1
Hypothetical protein.
  
  
 0.942
AND85325.1
Putative late competence development protein.
  
  
 0.936
smf
DNA uptake protein.
 
 
 0.885
AND85681.1
Hypothetical protein.
 
  
 0.818
comM
Magnesium chelatase-like protein.
 
  
 0.801
AND85058.1
Hypothetical protein; Belongs to the UPF0102 family.
 
    0.781
recD2_1
ATP-dependent RecD-like DNA helicase; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.
       0.659
tyrA
Prephenate dehydrogenase.
   
    0.642
comEA
Competence protein ComEA-like protein.
  
  
 0.619
flgC
Flagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.616
Your Current Organism:
Clostridium tyrobutyricum
NCBI taxonomy Id: 1519
Other names: ATCC 25755, C. tyrobutyricum, CCUG 48315, CIP 105092, Clostridium sp. GPRE 4-2, DSM 2637, JCM 11008
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.