Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
arlRResponse regulator. (227 aa)    
Predicted Functional Partners:
arlS
Signal transduction histidine kinase.
 
 0.996
tmoS
PAS domain S-box domain-containing protein.
 
 
 0.895
rpfC
Hypothetical protein.
 
 
0.868
AND84701.1
Signal transduction histidine kinase.
 
 
 0.836
todS
Sensory transduction histidine kinase.
  
   0.818
srrB
Sensor histidine kinase.
 
 
 0.813
phoR_3
Sensory transduction histidine kinase.
 
 
 0.805
baeS_2
Sensory transduction histidine kinase.
 
   0.793
AND84696.1
Sensor histidine kinase.
 
   0.791
yycG_2
Hypothetical protein.
 
 
 0.790
Your Current Organism:
Clostridium tyrobutyricum
NCBI taxonomy Id: 1519
Other names: ATCC 25755, C. tyrobutyricum, CCUG 48315, CIP 105092, Clostridium sp. GPRE 4-2, DSM 2637, JCM 11008
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.