STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssuC_10Hypothetical protein. (254 aa)    
Predicted Functional Partners:
cmpD_3
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
    0.946
tauB_5
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
    0.906
ssuA_4
ABC transporter, substrate-binding protein, aliphatic sulfonates family.
 
    0.831
ssuA_5
ABC transporter, substrate-binding protein, aliphatic sulfonates family.
 
    0.830
tauB_4
Taurine ABC transporter ATP-binding protein.
 
    0.824
tauB-2
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
    0.822
ssuB_1
Aliphatic sulfonates import ATP-binding protein SsuB.
 
    0.817
tauB
Taurine transport system ATP-binding protein.
    0.806
AND84745.1
ABC transporter ATPase.
 
    0.797
AND85345.1
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
    0.794
Your Current Organism:
Clostridium tyrobutyricum
NCBI taxonomy Id: 1519
Other names: ATCC 25755, C. tyrobutyricum, CCUG 48315, CIP 105092, Clostridium sp. GPRE 4-2, DSM 2637, JCM 11008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.