STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mocA_2Hypothetical protein. (368 aa)    
Predicted Functional Partners:
moaA1
Hypothetical protein.
     0.981
pucA_2
Xanthine dehydrogenase accessory factor.
 
  
 0.963
AND84971.1
Hypothetical protein.
 
     0.950
AND84973.1
Hypothetical protein.
 
     0.950
gltB_1
Fe-S oxidoreductase.
 
    0.950
ycgJ_2
Methyltransferase.
 
     0.947
cobC_2
Phosphoglycerate mutase-like protein.
     0.941
AND84969.1
Hypothetical protein.
 
     0.937
mop
Aldehyde oxidoreductase Mop.
 
  
 0.907
pucA_1
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family.
 
  
 0.842
Your Current Organism:
Clostridium tyrobutyricum
NCBI taxonomy Id: 1519
Other names: ATCC 25755, C. tyrobutyricum, CCUG 48315, CIP 105092, Clostridium sp. GPRE 4-2, DSM 2637, JCM 11008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.