Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
argG | aspB | CTK_C06710 | CTK_C17600 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Aspartate aminotransferase. | 0.917 |
argG | aspC_2 | CTK_C06710 | CTK_C22060 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Amino acid aminotransferase. | 0.917 |
argG | gltA | CTK_C06710 | CTK_C16330 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | NADPH-dependent glutamate synthase large subunit. | 0.722 |
argG | purA | CTK_C06710 | CTK_C30160 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.930 |
aspB | argG | CTK_C17600 | CTK_C06710 | Aspartate aminotransferase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.917 |
aspB | aspC_2 | CTK_C17600 | CTK_C22060 | Aspartate aminotransferase. | Amino acid aminotransferase. | 0.909 |
aspB | gdh | CTK_C17600 | CTK_C05620 | Aspartate aminotransferase. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.908 |
aspB | gltA | CTK_C17600 | CTK_C16330 | Aspartate aminotransferase. | NADPH-dependent glutamate synthase large subunit. | 0.945 |
aspB | ldh | CTK_C17600 | CTK_C07420 | Aspartate aminotransferase. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.919 |
aspB | ldh_2 | CTK_C17600 | CTK_C11900 | Aspartate aminotransferase. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.946 |
aspB | metC | CTK_C17600 | CTK_C15200 | Aspartate aminotransferase. | Cystathionine beta-lyase. | 0.916 |
aspB | pheA | CTK_C17600 | CTK_C27050 | Aspartate aminotransferase. | Prephenate dehydratase. | 0.988 |
aspB | purA | CTK_C17600 | CTK_C30160 | Aspartate aminotransferase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.911 |
aspB | tyrA | CTK_C17600 | CTK_C27080 | Aspartate aminotransferase. | Prephenate dehydrogenase. | 0.910 |
aspC_2 | argG | CTK_C22060 | CTK_C06710 | Amino acid aminotransferase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.917 |
aspC_2 | aspB | CTK_C22060 | CTK_C17600 | Amino acid aminotransferase. | Aspartate aminotransferase. | 0.909 |
aspC_2 | gdh | CTK_C22060 | CTK_C05620 | Amino acid aminotransferase. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.908 |
aspC_2 | gltA | CTK_C22060 | CTK_C16330 | Amino acid aminotransferase. | NADPH-dependent glutamate synthase large subunit. | 0.945 |
aspC_2 | ldh | CTK_C22060 | CTK_C07420 | Amino acid aminotransferase. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.919 |
aspC_2 | ldh_2 | CTK_C22060 | CTK_C11900 | Amino acid aminotransferase. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.936 |
page 1 of 4