STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HY22_00565Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (592 aa)    
Predicted Functional Partners:
HY22_00375
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.776
HY22_02690
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.746
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 
  0.680
HY22_12995
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.646
HY22_11005
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.640
HY22_07275
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.613
HY22_11645
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.591
HY22_00570
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.588
HY22_00075
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.583
HY22_04595
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.571
Your Current Organism:
Thermochlorobacteriaceae bacterium GBChlB
NCBI taxonomy Id: 1519464
Other names: C. Thermochlorobacteriaceae bacterium GBChlB, Candidatus Thermochlorobacteriaceae bacterium GBChlB, Chlorobium sp. GBChlB
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.