STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HY22_01360ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. (292 aa)    
Predicted Functional Partners:
HY22_09405
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.997
HY22_05170
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.994
HY22_02690
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.745
HY22_00075
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.673
HY22_13215
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.666
HY22_13005
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.663
HY22_12995
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.660
HY22_06910
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.649
HY22_11005
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.637
HY22_08105
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.636
Your Current Organism:
Thermochlorobacteriaceae bacterium GBChlB
NCBI taxonomy Id: 1519464
Other names: C. Thermochlorobacteriaceae bacterium GBChlB, Candidatus Thermochlorobacteriaceae bacterium GBChlB, Chlorobium sp. GBChlB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.