STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HY22_09275Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)    
Predicted Functional Partners:
HY22_09280
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
HY22_10740
3-oxoacyl-ACP synthase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.738
HY22_02140
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.709
HY22_04225
3-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.693
HY22_05335
Sugar dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.658
HY22_05215
Tropinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.646
HY22_09285
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    
0.646
HY22_01605
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.640
HY22_03410
2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.612
HY22_12315
hydroxymyristoyl-ACP dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis. Belongs to the LpxC family.
    
  0.602
Your Current Organism:
Thermochlorobacteriaceae bacterium GBChlB
NCBI taxonomy Id: 1519464
Other names: C. Thermochlorobacteriaceae bacterium GBChlB, Candidatus Thermochlorobacteriaceae bacterium GBChlB, Chlorobium sp. GBChlB
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