STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HY22_10670Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family. (906 aa)    
Predicted Functional Partners:
HY22_10680
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.848
HY22_11370
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.810
HY22_10675
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
       0.773
uxaC
Glucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.770
HY22_10645
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 28 family.
 
   
 0.676
HY22_06495
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.634
HY22_03830
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.605
HY22_03825
Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.
 
   
 0.603
HY22_03850
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.599
HY22_03855
Tat pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.586
Your Current Organism:
Thermochlorobacteriaceae bacterium GBChlB
NCBI taxonomy Id: 1519464
Other names: C. Thermochlorobacteriaceae bacterium GBChlB, Candidatus Thermochlorobacteriaceae bacterium GBChlB, Chlorobium sp. GBChlB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.