STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HY22_11385Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)    
Predicted Functional Partners:
HY22_00250
Molybdenum cofactor biosynthesis protein MoeB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.854
HY22_13435
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.626
HY22_10910
FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.582
HY22_07390
Bleomycin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.570
HY22_03205
3-phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
 0.569
HY22_11390
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.553
HY22_10180
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.545
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.544
HY22_05090
Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.543
fni
Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
     
 0.541
Your Current Organism:
Thermochlorobacteriaceae bacterium GBChlB
NCBI taxonomy Id: 1519464
Other names: C. Thermochlorobacteriaceae bacterium GBChlB, Candidatus Thermochlorobacteriaceae bacterium GBChlB, Chlorobium sp. GBChlB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.