STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPC79842.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (920 aa)    
Predicted Functional Partners:
KPC79843.1
Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.768
KPC82730.1
ATP synthase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.748
KPC80827.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.746
KPC84581.1
DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.725
KPC82333.1
Anti-sigma regulatory factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.700
KPC84384.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.678
KPC79844.1
Helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily.
       0.678
KPC82291.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.663
KPC79845.1
ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily.
       0.660
KPC82278.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.659
Your Current Organism:
Streptomyces sp. NRRLS4
NCBI taxonomy Id: 1519471
Other names: S. sp. NRRL S-4, Streptomyces sp. NRRL S-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.