STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU41578.1L-fuculose-phosphate aldolase. (372 aa)    
Predicted Functional Partners:
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
 0.954
SFU78055.1
Hexulose-6-phosphate isomerase.
 
  
 0.904
SFU74120.1
Sugar (pentulose or hexulose) kinase.
 
 
 0.888
SFU86268.1
Rhamnulokinase.
  
 
 0.849
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 
 0.807
proA
Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
       0.787
SFU41564.1
Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling).
  
    0.784
SFU86254.1
L-fuculose-phosphate aldolase.
  
  
 
0.760
uxaC
Glucuronate isomerase.
     
 0.729
SFV00998.1
Sugar phosphate isomerase/epimerase.
  
 
 0.708
Your Current Organism:
Butyrivibrio sp. INlla21
NCBI taxonomy Id: 1520811
Other names: B. sp. INlla21
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