STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB69765.1ATP-binding cassette, subfamily B. (605 aa)    
Predicted Functional Partners:
SFB69781.1
ATP-binding cassette, subfamily B.
 
    
0.831
SFB69797.1
Regulator of protease activity HflC, stomatin/prohibitin superfamily.
 
 
   0.824
SFB69816.1
Membrane protein implicated in regulation of membrane protease activity.
       0.773
SFB69730.1
Ribosomal protein S18 acetylase RimI.
       0.678
SFB69748.1
Predicted phosphodiesterase.
       0.678
SFB69832.1
Diguanylate cyclase (GGDEF) domain-containing protein.
       0.474
SFD03490.1
Amino acid adenylation domain-containing protein.
  
 
 0.458
SFD02782.1
Raffinose/stachyose/melibiose transport system substrate-binding protein.
  
  
  0.445
SFC36131.1
ABC-type multidrug transport system, ATPase and permease component.
  
  
 
0.441
SFC66692.1
Hsp70 protein; Belongs to the heat shock protein 70 family.
  
   0.422
Your Current Organism:
Butyrivibrio sp. YAB3001
NCBI taxonomy Id: 1520812
Other names: B. sp. YAB3001
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