STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB83859.18-oxo-dGTP diphosphatase. (247 aa)    
Predicted Functional Partners:
SFB83820.1
Phosphopantetheine adenylyltransferase.
       0.836
SFB83840.1
Nicotinamidase-related amidase.
 
     0.811
SFC47285.1
NAD synthase.
    
  0.674
SFB83773.1
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.
    
  0.618
pncB
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
       0.570
SFB83880.1
Repeat domain (List_Bact_rpt).
       0.461
Your Current Organism:
Butyrivibrio sp. YAB3001
NCBI taxonomy Id: 1520812
Other names: B. sp. YAB3001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.