STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IE00_00660Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)    
Predicted Functional Partners:
IE00_10810
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.969
IE00_01395
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.950
IE00_02700
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.902
IE00_18210
Heavy metal resistance-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.760
lolD
ABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 0.738
IE00_03500
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.715
IE00_00645
Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.661
IE00_00650
Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.661
IE00_00655
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.661
IE00_03505
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.641
Your Current Organism:
Paracoccus sp. SM22M07
NCBI taxonomy Id: 1520813
Other names: P. sp. SM22M-07, Paracoccus sp. SM22M-07
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.