STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW35657.1Methyltransferase domain-containing protein. (214 aa)    
Predicted Functional Partners:
SCW35642.1
ADP-ribose pyrophosphatase YjhB, NUDIX family.
       0.773
SCW35526.1
Ubiquinone/menaquinone biosynthesis C-methylase UbiE.
    
 0.615
SCW37453.1
Methyltransferase domain-containing protein.
  
 
 0.606
SCW60044.1
Hypothetical protein.
  
 
 0.606
SCW64867.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.601
SCW26942.1
4-hydroxybenzoate polyprenyltransferase.
  
 
  0.586
SCW35628.1
Hypothetical protein.
       0.559
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
    
 0.553
SCW32962.1
tRNA (cmo5U34)-methyltransferase.
    
 0.524
SCW49843.1
Methyltransferase domain-containing protein.
    
 0.524
Your Current Organism:
Ruminococcaceae bacterium YRB3002
NCBI taxonomy Id: 1520819
Other names: R. bacterium YRB3002
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