STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT57705.1Beta-glucosidase. (821 aa)    
Predicted Functional Partners:
SFT36027.1
Beta-glucosidase.
  
  
 
0.719
SFT40432.1
Tetratricopeptide repeat-containing protein.
    
  0.707
SFT60661.1
Glycosyltransferase family 36.
 
  
 0.702
SFT51640.1
Cellobiose phosphorylase.
 
  
 0.649
SFT40898.1
Cell wall-associated hydrolase, NlpC family.
    
  0.631
SFT51695.1
SH3 domain-containing protein.
    
  0.631
SFT62342.1
Cell wall-associated hydrolase, NlpC family.
    
  0.631
SFT58825.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
    
 0.618
SFT33317.1
N-acetylmuramoyl-L-alanine amidase.
  
  
  0.531
SFT32627.1
Endoglucanase.
     
 0.528
Your Current Organism:
Lachnospiraceae bacterium XBD2001
NCBI taxonomy Id: 1520820
Other names: L. bacterium XBD2001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.