STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP55193.1Copper chaperone CopZ. (124 aa)    
Predicted Functional Partners:
SEP55207.1
ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase.
 
 0.907
SEQ01545.1
Cd2+/Zn2+-exporting ATPase.
 
 0.874
SEQ01595.1
Heavy-metal-associated domain-containing protein.
  
 0.853
SEQ23889.1
Cu2+-exporting ATPase.
 
 0.851
SEQ99255.1
Cu2+-exporting ATPase.
 
 0.851
SEP54647.1
Predicted transcriptional regulator.
  
  
 0.674
SEP55184.1
Ferrous iron transport protein B.
  
  
 0.514
SEP55199.1
Hypothetical protein.
       0.450
SEP55166.1
Ferrous iron transport protein A.
 
     0.449
rplN
LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
   0.403
Your Current Organism:
Lachnospiraceae bacterium NE2001
NCBI taxonomy Id: 1520823
Other names: L. bacterium NE2001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.