STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ16640.1Alginate O-acetyltransferase complex protein AlgI; Belongs to the membrane-bound acyltransferase family. (456 aa)    
Predicted Functional Partners:
SEQ16564.1
Acyl carrier protein.
  
   0.824
SEQ17534.1
Hypothetical protein.
  
   0.674
SEQ16530.1
D-alanyl-lipoteichoic acid acyltransferase DltB, MBOAT superfamily; Belongs to the membrane-bound acyltransferase family.
 
    
0.652
SEQ60391.1
Phosphopantetheine attachment site.
  
   0.651
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
   0.632
SEQ03960.1
Acyl carrier protein.
   
   0.632
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
   0.632
SER06809.1
Hypothetical protein.
 
     0.563
SEP66117.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
  
 0.558
SEQ16601.1
HAD-superfamily phosphatase, subfamily IIIC/FkbH-like domain-containing protein.
       0.558
Your Current Organism:
Lachnospiraceae bacterium NE2001
NCBI taxonomy Id: 1520823
Other names: L. bacterium NE2001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.