Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCX93191.1 | SCX93217.1 | SAMN02910370_00753 | SAMN02910370_00754 | Hypothetical protein. | Hypothetical protein. | 0.879 |
SCX93191.1 | SCX93232.1 | SAMN02910370_00753 | SAMN02910370_00755 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SCX93191.1 | SCX93279.1 | SAMN02910370_00753 | SAMN02910370_00757 | Hypothetical protein. | Phosphate starvation-inducible protein PhoH. | 0.851 |
SCX93191.1 | SCX93311.1 | SAMN02910370_00753 | SAMN02910370_00758 | Hypothetical protein. | 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family. | 0.784 |
SCX93191.1 | SCX93335.1 | SAMN02910370_00753 | SAMN02910370_00759 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SCX93191.1 | SCX93355.1 | SAMN02910370_00753 | SAMN02910370_00760 | Hypothetical protein. | Uncharacterised protein family UPF0547. | 0.773 |
SCX93191.1 | SCX93481.1 | SAMN02910370_00753 | SAMN02910370_00765 | Hypothetical protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.677 |
SCX93191.1 | fhs | SAMN02910370_00753 | SAMN02910370_00762 | Hypothetical protein. | Formate-tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family. | 0.713 |
SCX93191.1 | folD | SAMN02910370_00753 | SAMN02910370_00761 | Hypothetical protein. | Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.885 |
SCX93191.1 | ybeY | SAMN02910370_00753 | SAMN02910370_00756 | Hypothetical protein. | Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.849 |
SCX93217.1 | SCX93191.1 | SAMN02910370_00754 | SAMN02910370_00753 | Hypothetical protein. | Hypothetical protein. | 0.879 |
SCX93217.1 | SCX93232.1 | SAMN02910370_00754 | SAMN02910370_00755 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SCX93217.1 | SCX93279.1 | SAMN02910370_00754 | SAMN02910370_00757 | Hypothetical protein. | Phosphate starvation-inducible protein PhoH. | 0.849 |
SCX93217.1 | SCX93311.1 | SAMN02910370_00754 | SAMN02910370_00758 | Hypothetical protein. | 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family. | 0.811 |
SCX93217.1 | SCX93335.1 | SAMN02910370_00754 | SAMN02910370_00759 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SCX93217.1 | SCX93355.1 | SAMN02910370_00754 | SAMN02910370_00760 | Hypothetical protein. | Uncharacterised protein family UPF0547. | 0.773 |
SCX93217.1 | SCX93481.1 | SAMN02910370_00754 | SAMN02910370_00765 | Hypothetical protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.677 |
SCX93217.1 | fhs | SAMN02910370_00754 | SAMN02910370_00762 | Hypothetical protein. | Formate-tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family. | 0.713 |
SCX93217.1 | folD | SAMN02910370_00754 | SAMN02910370_00761 | Hypothetical protein. | Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.778 |
SCX93217.1 | ybeY | SAMN02910370_00754 | SAMN02910370_00756 | Hypothetical protein. | Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.849 |
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